Assistant Data Scientist Genomic Medicine
- Requisition #: 172504
- Department: Genomic Med Rsch Department
- Location: Houston, TX
- Posted Date: 1/9/2025
The primary purpose of the Assistant Data Scientist is to work as a computational scientist in the laboratory of Dr Kunal Rai, in Genomic Medicine Department at The University of Texas MD Anderson Cancer Center, Houston, Texas. The position is focused on discovery of cancer-driving epigenome-networks by applying computational methods for the analysis of single cell multiome and spatial transcriptomics and epigenomics (ATAC-Seq/CUT&Tag) datasets and integrate with complex high-dimensional omics datasets from tumor samples in different cancer types/malignancies. This position will also collaborate with a group of wet lab and computational scientists to derive novel biological insights and identify biomarkers and therapies.
Rai laboratory is situated in a highly dynamic and stimulatory environment for learning. MD Anderson Cancer Center is a top-rated hospital in cancer care in the United States. The institute offers active graduate and postdoctoral training programs and the unmatched scientific environment of the Texas Medical Center, the world's largest biomedical center.
JOB SPECIFIC COMPETENCIES
* Analysis of Spatial transcriptomics and/or other multi-dimensional omic data modalities,
* Develop and maintain pipelines for bioinformatics and statistical analyses of aforementioned data types; activities to include handling raw data, evaluating outputs, optimizing parameters, and summarizing findings.
* Collaborate with interdisciplinary teams to analyze data from various single cell and spatial platforms.
* Present results at multidisciplinary project meetings.
* Produce output for scientific publications and co-author said publications.
* Prepare written reports, manuscripts, and grant applications with investigators.
* Work closely with the team and collaborators to discover novel therapeutic opportunities for cancer patients.
Expected Skills
* Some knowledge of bioinformatics tools and their implementation as part of pipelines,
* Analyzing and interpreting outputs of analytic pipelines to identify insights and hypotheses from data.
* Understanding of essential statistical methodologies required for bioinformatics analyses.
* Addressing challenges in bioinformatics as well as mitigation strategies such as bias, batch correction, etc.
* Utilizing High Performance Computing to run large-scale analyses.
* Unix, R, Python, or other scripting/programming languages.
* Other duties as assigned.
With Drive, you see that you can serve as a leader whether you have a formal leadership role or not. You tackle problems, move past setbacks and hardships, and do not lose sight of your goals. (Competencies: Self-Confidence, Analytical Thinking, Innovative Thinking, Technical Expertise)
You demonstrate Professionalism by setting the example for others and consistently modeling MD Anderson's values and service standards. You communicate effectively in a variety of ways. (Competencies: Inspire Trust, Oral Communication, Written Communication)
Through Emotional Intelligence, you maintain awareness of your own emotions and the emotions of those around you. Use nonverbal cues and feelings to engage others in responsive way. (Competencies: Active Listening, Teaming, Self-Reflection)
Having Coachability means you are engaged in relentless learning. You constantly ask questions and stay curious. You understand that the organization constantly evolves, and you should as well. (Competencies: Develop Oneself, Adaptability)
Ideal Candidate will have:
* Must be honest, highly motivated, reliable, responsible, and well-organized.
* Strong attention to detail, with the ability to multi-task and a willingness to learn new methods and technologies.
* Excellent written and verbal communication skills.
* Ability to work effectively in a collaborative and interdisciplinary team environment (strong plus).
* Possess strong problem-solving skills with the ability to analyze complex issues and develop effective solutions.
Onsite Presence/Hybrid.
WORKING CONDITIONS
PHYSICAL DEMANDS
COGNITIVE DEMANDS
EDUCATION:
Required: Bachelor's degree in Biomedical Engineering, Electrical Engineering, Computer Engineering, Physics, Applied Mathematics, Statistics, Computer Science, Computational Biology, or related field.
Preferred: Master's degree in Biomedical Engineering, Electrical Engineering, Computer Engineering, Physics, Applied Mathematics, Statistics, Computer Science, Computational Biology, or related field.
EXPERIENCE:
Required: Current or Previous MD Anderson experience. Genomic data experience.
It is the policy of The University of Texas MD Anderson Cancer Center to provide equal employment opportunity without regard to race, color, religion, age, national origin, sex, gender, sexual orientation, gender identity/expression, disability, protected veteran status, genetic information, or any other basis protected by institutional policy or by federal, state or local laws unless such distinction is required by law. http://www.mdanderson.org/about-us/legal-and-policy/legal-statements/eeo-affirmative-action.html
Additional Information
#LI-Hybrid
Rai laboratory is situated in a highly dynamic and stimulatory environment for learning. MD Anderson Cancer Center is a top-rated hospital in cancer care in the United States. The institute offers active graduate and postdoctoral training programs and the unmatched scientific environment of the Texas Medical Center, the world's largest biomedical center.
JOB SPECIFIC COMPETENCIES
* Analysis of Spatial transcriptomics and/or other multi-dimensional omic data modalities,
* Develop and maintain pipelines for bioinformatics and statistical analyses of aforementioned data types; activities to include handling raw data, evaluating outputs, optimizing parameters, and summarizing findings.
* Collaborate with interdisciplinary teams to analyze data from various single cell and spatial platforms.
* Present results at multidisciplinary project meetings.
* Produce output for scientific publications and co-author said publications.
* Prepare written reports, manuscripts, and grant applications with investigators.
* Work closely with the team and collaborators to discover novel therapeutic opportunities for cancer patients.
Expected Skills
* Some knowledge of bioinformatics tools and their implementation as part of pipelines,
* Analyzing and interpreting outputs of analytic pipelines to identify insights and hypotheses from data.
* Understanding of essential statistical methodologies required for bioinformatics analyses.
* Addressing challenges in bioinformatics as well as mitigation strategies such as bias, batch correction, etc.
* Utilizing High Performance Computing to run large-scale analyses.
* Unix, R, Python, or other scripting/programming languages.
* Other duties as assigned.
With Drive, you see that you can serve as a leader whether you have a formal leadership role or not. You tackle problems, move past setbacks and hardships, and do not lose sight of your goals. (Competencies: Self-Confidence, Analytical Thinking, Innovative Thinking, Technical Expertise)
You demonstrate Professionalism by setting the example for others and consistently modeling MD Anderson's values and service standards. You communicate effectively in a variety of ways. (Competencies: Inspire Trust, Oral Communication, Written Communication)
Through Emotional Intelligence, you maintain awareness of your own emotions and the emotions of those around you. Use nonverbal cues and feelings to engage others in responsive way. (Competencies: Active Listening, Teaming, Self-Reflection)
Having Coachability means you are engaged in relentless learning. You constantly ask questions and stay curious. You understand that the organization constantly evolves, and you should as well. (Competencies: Develop Oneself, Adaptability)
Ideal Candidate will have:
* Must be honest, highly motivated, reliable, responsible, and well-organized.
* Strong attention to detail, with the ability to multi-task and a willingness to learn new methods and technologies.
* Excellent written and verbal communication skills.
* Ability to work effectively in a collaborative and interdisciplinary team environment (strong plus).
* Possess strong problem-solving skills with the ability to analyze complex issues and develop effective solutions.
Onsite Presence/Hybrid.
WORKING CONDITIONS
| | Frequency |
| Deadlines | -- |
PHYSICAL DEMANDS
| | Frequency | Weight |
| Sitting Keyboarding Carrying Lifting Standing Pushing/Pulling Reaching | Constant 67-100% Constant 67-100% Occasionally 11-33% Seldom 3-10% Occasionally 11-33% Occasionally 11-33% Seldom 3-10% | -- -- 10-20 lbs. 10-20 lbs. -- 10-20 lbs. -- |
COGNITIVE DEMANDS
| Analytical Ability Attention to detail Interpersonal Skills Oral Communication Working Alone Written Communication |
EDUCATION:
Required: Bachelor's degree in Biomedical Engineering, Electrical Engineering, Computer Engineering, Physics, Applied Mathematics, Statistics, Computer Science, Computational Biology, or related field.
Preferred: Master's degree in Biomedical Engineering, Electrical Engineering, Computer Engineering, Physics, Applied Mathematics, Statistics, Computer Science, Computational Biology, or related field.
EXPERIENCE:
Required: Current or Previous MD Anderson experience. Genomic data experience.
It is the policy of The University of Texas MD Anderson Cancer Center to provide equal employment opportunity without regard to race, color, religion, age, national origin, sex, gender, sexual orientation, gender identity/expression, disability, protected veteran status, genetic information, or any other basis protected by institutional policy or by federal, state or local laws unless such distinction is required by law. http://www.mdanderson.org/about-us/legal-and-policy/legal-statements/eeo-affirmative-action.html
Additional Information
- Requisition ID: 172504
- Employment Status: Full-Time
- Employee Status: Regular
- Work Week: Days
- Minimum Salary: US Dollar (USD) 66,000
- Midpoint Salary: US Dollar (USD) 82,500
- Maximum Salary : US Dollar (USD) 99,000
- FLSA: exempt and not eligible for overtime pay
- Fund Type: Soft
- Work Location: Hybrid Onsite/Remote
- Pivotal Position: Yes
- Referral Bonus Available?: Yes
- Relocation Assistance Available?: Yes
- Science Jobs: Yes
#LI-Hybrid
